Update a sequence of base parameter annual values to account for a time varying environmental effects

Usage

update_basevals_env(
  base_vals,
  base_years,
  temp_env,
  current_par,
  timeseries,
  temp_ctl,
  dat,
  base_range,
  base_bounds,
  parlist
)

base_vals: A vector of base parameter values that will be updated to include the impact of a time varying environmental effects
base_years: A vector of years for which the base values are needed
temp_env: The time varying parameter lines for the environmental effects on the base parameter
current_par: The index of the current parameter being updated
timeseries: The timeseries table from r4ss::SS_output().
temp_ctl: A subset of the control file representing the parameter section of interest (i.e. MG, SR, Q, or Selectivity)
dat: A datafile as read in by r4ss::SS_readdat
base_range: the difference between the base parameters max and min bounds
base_bounds: The min and max bounds of the base parameter
parlist: A parameter file as read in by r4ss::SS_readpar_3.30

A modified parameter series that incorporates the appropriate time varying environmental effects.

Nathan Vaughan